Clinical Techniques

MRI

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  • Nuclear dipoles (protons) are aligned with each other by a strong external magnetic field
  • The protons rotate (precess) around their own axes in different phases
  • The direction of nuclear dipole alignment is then altered by a radio frequency pulse
  • The protons also precess in phase with each other in response to the pulse
  • The pulse then dissipates
    • The protons realign along the original magnetic field (T1 relaxation)
    • They begin to rotate out of phase again (T2 relaxation)
  • The relaxation releases signals that are detected by receiver coils which a computer builds into images

Hot Topic

STIR and FLAIR MRI sequences

  • Short tau inversion recovery (STIR) sequences correlate strongly with orbital inflammation and clinical activity scores in thyroid eye disease (T2 STIR specifically)

  • Fluid-attenuated inversion recovery (FLAIR) sequences employ fluid suppression techniques to highlight paraventricular pathology: useful to identify demyelination

Summary Table: T1 vs T2 MRI features

TissueT1T2
AirBlack Black 
BoneBlackBlack
CalciumBlackBlack
CSF (ie. low protein fluid)DarkBright
Vitreous Black Bright 
White matterGreyDark
Grey matterGreyGrey
Acute bloodGreyDark
Subacute bloodBrightBright
FatBrightModerately bright
MucousBrightDark
 Long T1 times render substances hypointense (dark) on T1 MRI 
Gadolinium is visible on T1 weighting 

Advantages over CT

  • No ionising radiation: useful for pregnant patient or children
  • High soft tissue contrast: can differentiate white and grey matter
  • Vasculature can be imaged without contrast: useful if renal impairment
  • No artefact from bone
  • Functional imaging
    • DWI: assesses movement of water molecules to characterise lesions
    • Functional: assesses differences in metabolic rate of tissues by detecting different oxygen concentrations

MRI features of choroidal lesions

 T1T2Contrast enhancement
Choroidal melanomaHyperintense Hypointense Marked 
Choroidal haemangiomaHyperintenseHyperintenseMarked 
Choroidal osteomaHyperintense Hypointense Central core enhanced
Choroidal metastasisHyperintense Hypointense Marked 

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