Microbiology

Antimicrobials

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Penicillins

  • Bactericidal
  • Produced from fungi and molecular modification
  • Interfere with bacterial cell wall production (disrupt) cross linking of glycan strands)
  • Renally excreted
  • Most effective:
    • Staphylococci (although now commonly resistant, flucloxacillin prevents the action of beta-lactamases)

    • Streptococci 
    • Clostridia (Gram positive bacilli)
    • Gram negative bacilli such as E. coli and H. influenzae

Cephalosporins

  • Bactericidal
  • Inhibit bacterial cell wall synthesis
  • Broader spectrum than penicillins: effective against beta-lactamase producers
  • Later generation agents have effectivity against more Gram negative organisms including pseudomonas and bacteroides

Aminoglycosides: gentamicin

  • Bactericidal
  • Prevents the first ribosome from joining the mRNA by irreversibly binding to the 30S subunit

  • Efficacy: 
    • Staphylococci
    • Aerobic Gram negatives eg. pseudomonas, proteus
  • Not effective against streptococci and anaerobes
  • Parenteral administration associated with adverse effects: vestibular, cochlear, renal (rare)

Hot Topic

Topical gentamicin can cause corneal epithelial toxicity and intravitreal can cause retinal toxicity

  • Amikacin is an aminoglycoside with good Gram negative activity
    • Commonly given intravitreally
    • Useful for patients with significant penicillin allergy
    • Less retinotoxic than gentamicin

Hot Topic

Amikacin has poor ocular penetration from the circulation: 

  • Aminoglycosides do not cross the blood-brain barrier and so do not enter the vitreous
  • Not given systemically in endophthalmitis

Tetracyclines

  • Bacteriostatic
  • Interrupt amino acid attachment during protein synthesis, also by targeting the 30S subunit of the ribosome

  • Broad spectrum
  • Treatment of choice for chlamydial infections (eg. trachoma), brucellosis, Q fever

Hot Topic

Tetracyclines are contraindicated in pregnancy and in patients under 10 years of age

  • Side effects
    • GI upset
    • Birth defects
    • Permanent teeth staining in children
    • Diarrhoea 

Chloramphenicol

  • Bacteriostatic
  • Prevents peptide chain transfer to other amino acids by targeting the 50S subunit of the ribosome: inhibiting protein synthesis (specifically inhibits peptidyltransferase)

  • Potent against staphylococci (hence use for bacterial conjunctivitis)
  • Systemic use limited to H. influenzae, meningitis, typhoid
    • Can cause potentially fatal aplastic anaemia
  • Contraindicated in pregnancy and breastfeeding: grey baby syndrome

Metronidazole

  • Disrupts DNA synthesis
  • Crosses the blood-brain barrier
  • Efficacy: 
    • Anaerobic organisms
    • Protozoa including trichomonas and giardia

Ofloxacin

  • Fluoroquinolone
  • Bactericidal 
  • Inhibits bacterial DNA gyrase: DNA synthesis inhibitor
  • Broad spectrum:
    • Pseudomonas
    • Chlamydiae
    • Mycoplasmas
    • Rickettsia
    • Enterobacteriaceae 
  • Less effective against Gram positives and anaerobes
  • Good corneal penetration into the AC
  • Systemic use: GI upset and photosensitivity

Hot Topic

Long-term use of topical ciprofloxacin can cause corneal crystalline precipitates (probably representing precipitation of the drug which requires low pH for solubility).

Vancomycin

  • Glycopeptide
  • Bactericidal against Gram positives
  • Inhibits peptidoglycan assembly and therefore cell wall synthesis
  • Good Gram positive efficacy (ineffective against Gram negative)

Hot Topic

Vancomycin has strong potency against staphylococci and does not cause retinal toxicity therefore widely used for intravitreal treatment of endophthalmitis.

  • Cannot penetrate the outer membrane of Gram negatives
  • Poor GI absorption

Amphotericin

  • Macrolide polyene antifungal
  • Broad spectrum including most fungi that infect humans
  • Not absorbed enterally (must be given IV or intravitreally eg. for Candidal endophthalmitis)

  • Binds to sterols in cell membranes and has a high affinity for ergosterol: the major sterol in fungal membranes

    • Creates ion channels in the membrane leading to loss of membrane integrity
  • Adverse effects:
    • Anaemia
    • Nephrotoxicity

Fluconazole

  • Azoles: alter fungal membranes by blocking synthesis of ergosterol leading to cell leakage

  • Active against most Candida, Cryptococcus and Histoplasma
  • Not effective against aspergillus or mucor
  • Hepatotoxic
  • Good CNS uptake
  • Given intravenously or orally 

Flucytosine

  • Disrupts fungal protein and DNA synthesis
  • Effective against candida and cryptococcal infections
  • Good tissue and CSF penetration
  • Marrow aplasia (although not hepatotoxic)
  • Fungal resistance is common

Aciclovir

  • Acyclic analogue of guanosine
  • Activated via phosphorylation by viral thymidine kinase and thereafter inhibits DNA polymerase

    • The viral form of thymidine kinase is more effective at this activation than the human form so infected cells are preferentially affected

  • Highly specific for HSV and VZV (lesser activity against EBV and CMV).
  • Side effects:
    • Renal impairment (mild): with intravenous use
    • GI upset
    • Headache

Ganciclovir

  • Acyclic nucleotide analogue with a hydroxymethyl group (cp. with aciclovir)
  • Virostatic 
  • Inhibits CMV DNA polymerase

Hot Topic

Ganciclovir is many times more effective than aciclovir against CMV and similarly effective against HSV and VZV

  • Given intravenously or intravitreally (for CMV retinitis)
  • Administered in inactive form which is phosphorylated after uptake by virally-infected cells

  • UL97 mutation renders ganciclovir susceptible to resistance
  • Side effects
    • Haematological (bone marrow suppression: neutropenia (40% of patients), thrombocytopenia (20%)

Foscarnet

  • Antiviral: binds to DNA polymerase to prevent nucleotide binding
  • Given intravenously or intravitreally
  • Side effects: nephrotoxicity

Summary Table: Bacteriostatic vs Bactericidal agents and mechanisms of action

Bacteriostatic
ChloramphenicolInhibits peptide chain transfer (protein synthesis)Potent against staphylococci but limited systemic use (aplastic anaemia)
TetracyclinesProtein synthesis inhibitorsBroad spectrum including chlamydia
Bactericidal
PenicillinsCell wall synthesis inhibitors via glycan strand crosslinkingLimited by beta-lactamase producers
Cephalosporins Cell wall synthesis inhibitorsBroader spectrum
Fluoroquinolones (ofloxacin)DNA gyrase inhibitorsGood gram negative cover and corneal penetration
VancomycinGlycopeptide: inhibits peptidoglycan assembly therefore cell wall synthesisBactericidal against gram positives only. Poor GI absorption
Aminoglycosides (gentamicin)Protein synthesis inhibitorsStaphylococci and Gram negative cover. Retinal toxicity

anti-HIV agents

  • Ritonavir: protease inhibitor 
    • Nausea and diarrhoea
  • Zidovudine: reverse transcriptase inhibitor 
    • Cytopenia
  • Didanosine: reverse transcriptase inhibitor
    • Pancreatitis
  • Zalcitabine: reverse transcriptase inhibitor
    • Peripheral neuropathy

Sulfadiazine

  • Blocks the production of dihydrofolate from para-aminobenzoic acid
  • Used in the treatment of Toxoplasma gondii

Pyramethamine

  • Dihydrofolate reductase inhibitor
  • Used in the treatment of Toxoplasma gondii

Antibiotic resistance

  • Mutation
  • Conjugation
  • Plasmid transfer

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